Amber Biology has been engaged to perform a full-scale overhaul of Python for Population Genomics (PyPop). PyPop is an open-source framework for large-scale population genomics. implemented to probe genotype data for signatures of natural selection.…

Project, Genomics, Python, Software DevelopmentAlex LancasterSeptember 29, 2017genome, genomics, genetics, genes, next-generation sequencing, sequencing, ngs, alleles, population genetics, pypop, hardy-weinberg

RNA-Based Diagnostics Platform

Amber Biology created code to implement advanced pattern matching algorithms for a novel RNA-based disease diagnostic platform…

Project, Biomarkers, Python, Software Development, GenomicsAlex LancasterSeptember 29, 2017genome, genomics, genetics, genes, next-generation sequencing, sequencing, ngs, alleles, population genetics, rna, diagnostics, biomarker, cloud computing

Workflow engine for large-scale sequence data

An Amber principal was involved in the development of the open-source COSMOS Python library for managing large-scale sequencing workflows.