Amber Biology has been engaged to perform a full-scale overhaul of Python for Population Genomics (PyPop). PyPop is an open-source framework for large-scale population genomics. implemented to probe genotype data for signatures of natural selection.…
Read MoreAmber Biology was hired to create sophisticated, custom machine control and user interface software for a medical diagnostic robot being developed by a team at Harvard Medical School
Read MoreAmber Biology created code to implement advanced pattern matching algorithms for a novel RNA-based disease diagnostic platform…
Read MoreAlgorithms were implemented in Python to correlate biomolecule manufacturing outcomes with process parameters, in order to improve the consistency and predictability of the manufacturing process…
Read MoreSoftware development of Swarm, a pioneering open-source agent-based modeling toolkit from the Santa Fe Institute, and consulting with scientists using this toolkit to model complex biological systems such as transcription factor networks…
Read MoreHidden Markov Model algorithms for searching protein sequences for potential prion-like, structured regions of proteins were implemented in an Open Source software platform available to scientists under the MIT License…
Read MoreAn Amber principal was involved in the development of the open-source COSMOS Python library for managing large-scale sequencing workflows.
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